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Image Search Results
Journal: The Journal of Experimental Medicine
Article Title: HDAC stimulates gene expression through BRD4 availability in response to IFN and in interferonopathies
doi: 10.1084/jem.20180520
Figure Lengend Snippet: Class I HDAC mediates ISG expression. (A and B) HeLa cells were treated with IFN-α for 6 h in the absence or presence of increasing concentrations of Romidepsin or TSA, as indicated. RNA was quantified by real-time RT-PCR for ISG54 and p21 WAF1/Cip1 expression, normalized to GAPDH, and represented as fold induction over untreated cells. (C) HeLa cells were treated with IFN-α for 6 h in the absence or presence of increasing concentrations of romidepsin, RGFP966, or RGFP233, as indicated. RNA was quantified by real-time RT-PCR for IRF9 expression, normalized to GAPDH, and represented as fold induction over untreated cells. (D and E) HEK293 cells were transfected with siRNA against HDAC1, HDAC2, or E2F4 separately (D) or with a combination of HDAC1 and HDAC2 targeting oligonucleotides (E), and cells were stimulated with IFN-α for 6 h (α) in the presence (αΤ) or absence of TSA, as indicated. Whole-cell extracts were analyzed for expression of the indicated proteins by Western blotting (left). ISG54 expression was quantified by real-time RT-PCR and represented in arbitrary units (right). MW, molecular weight. A.U., arbitrary units. (F) HEK293T cells were transfected with pcDNA3 (Ctl), HDAC1, or HDAC2 expression constructs, and ISG54 expression was quantified after stimulation with IFN-α for 10 h. Representative data from two experiments are shown. (G) Sin3A F/– and Sin3A F/– Sin3B F/– immortalized mouse embryonic fibroblasts expressing Cre-ERT2 were treated for 3 d with 4OH-tamoxifen (4OH-T) or left untreated. Nuclear extracts were analyzed for expression of Sin3B by Western blotting (middle). Expression of Sin3A, represented as percent expression relative to levels before tamoxifen treatment (left) and expression of IRF9 mRNA before and after tamoxifen (right), were quantified by real-time RT-PCR and normalized to GAPDH mRNA expression. Weak expression of Sin3B protein in Sin3A F/– Sin3B F/– fibroblasts before 4OH-T treatment is likely due to some leakiness of Cre recombinase expression. Quantitative data are representative examples of three (A and F) or two (B, C, E, and G) independent experiments, each performed in duplicate, and error bars represent +SD. *, P < 0.05; **, P < 0.005; ***, P < 0.001.
Article Snippet: Antibodies used were anti-IRF9 , anti-STAT1, anti-STAT2, anti-phospho-STAT1 and anti-phospho-STAT2 (Invitrogen), anti–α-tubulin (T9026; Sigma), anti-HDAC1 (clone 2E10, 05-614; Millipore Sigma), anti-HDAC2 (clone 3F3, 05-814; Millipore Sigma),
Techniques: Expressing, Quantitative RT-PCR, Transfection, Western Blot, Molecular Weight, Construct
Journal: The Journal of Experimental Medicine
Article Title: HDAC stimulates gene expression through BRD4 availability in response to IFN and in interferonopathies
doi: 10.1084/jem.20180520
Figure Lengend Snippet: Class I HDAC mediates ISG expression. (A and B) HeLa cells were treated with IFN-α for 6 h in the absence or presence of increasing concentrations of Romidepsin or TSA, as indicated. RNA was quantified by real-time RT-PCR for ISG54 and p21 WAF1/Cip1 expression, normalized to GAPDH, and represented as fold induction over untreated cells. (C) HeLa cells were treated with IFN-α for 6 h in the absence or presence of increasing concentrations of romidepsin, RGFP966, or RGFP233, as indicated. RNA was quantified by real-time RT-PCR for IRF9 expression, normalized to GAPDH, and represented as fold induction over untreated cells. (D and E) HEK293 cells were transfected with siRNA against HDAC1, HDAC2, or E2F4 separately (D) or with a combination of HDAC1 and HDAC2 targeting oligonucleotides (E), and cells were stimulated with IFN-α for 6 h (α) in the presence (αΤ) or absence of TSA, as indicated. Whole-cell extracts were analyzed for expression of the indicated proteins by Western blotting (left). ISG54 expression was quantified by real-time RT-PCR and represented in arbitrary units (right). MW, molecular weight. A.U., arbitrary units. (F) HEK293T cells were transfected with pcDNA3 (Ctl), HDAC1, or HDAC2 expression constructs, and ISG54 expression was quantified after stimulation with IFN-α for 10 h. Representative data from two experiments are shown. (G) Sin3A F/– and Sin3A F/– Sin3B F/– immortalized mouse embryonic fibroblasts expressing Cre-ERT2 were treated for 3 d with 4OH-tamoxifen (4OH-T) or left untreated. Nuclear extracts were analyzed for expression of Sin3B by Western blotting (middle). Expression of Sin3A, represented as percent expression relative to levels before tamoxifen treatment (left) and expression of IRF9 mRNA before and after tamoxifen (right), were quantified by real-time RT-PCR and normalized to GAPDH mRNA expression. Weak expression of Sin3B protein in Sin3A F/– Sin3B F/– fibroblasts before 4OH-T treatment is likely due to some leakiness of Cre recombinase expression. Quantitative data are representative examples of three (A and F) or two (B, C, E, and G) independent experiments, each performed in duplicate, and error bars represent +SD. *, P < 0.05; **, P < 0.005; ***, P < 0.001.
Article Snippet: Antibodies used were anti-IRF9 , anti-STAT1, anti-STAT2, anti-phospho-STAT1 and anti-phospho-STAT2 (Invitrogen), anti–α-tubulin (T9026; Sigma),
Techniques: Expressing, Quantitative RT-PCR, Transfection, Western Blot, Molecular Weight, Construct
Journal: The Journal of Experimental Medicine
Article Title: HDAC stimulates gene expression through BRD4 availability in response to IFN and in interferonopathies
doi: 10.1084/jem.20180520
Figure Lengend Snippet: Class I HDAC mediates ISG expression. (A and B) HeLa cells were treated with IFN-α for 6 h in the absence or presence of increasing concentrations of Romidepsin or TSA, as indicated. RNA was quantified by real-time RT-PCR for ISG54 and p21 WAF1/Cip1 expression, normalized to GAPDH, and represented as fold induction over untreated cells. (C) HeLa cells were treated with IFN-α for 6 h in the absence or presence of increasing concentrations of romidepsin, RGFP966, or RGFP233, as indicated. RNA was quantified by real-time RT-PCR for IRF9 expression, normalized to GAPDH, and represented as fold induction over untreated cells. (D and E) HEK293 cells were transfected with siRNA against HDAC1, HDAC2, or E2F4 separately (D) or with a combination of HDAC1 and HDAC2 targeting oligonucleotides (E), and cells were stimulated with IFN-α for 6 h (α) in the presence (αΤ) or absence of TSA, as indicated. Whole-cell extracts were analyzed for expression of the indicated proteins by Western blotting (left). ISG54 expression was quantified by real-time RT-PCR and represented in arbitrary units (right). MW, molecular weight. A.U., arbitrary units. (F) HEK293T cells were transfected with pcDNA3 (Ctl), HDAC1, or HDAC2 expression constructs, and ISG54 expression was quantified after stimulation with IFN-α for 10 h. Representative data from two experiments are shown. (G) Sin3A F/– and Sin3A F/– Sin3B F/– immortalized mouse embryonic fibroblasts expressing Cre-ERT2 were treated for 3 d with 4OH-tamoxifen (4OH-T) or left untreated. Nuclear extracts were analyzed for expression of Sin3B by Western blotting (middle). Expression of Sin3A, represented as percent expression relative to levels before tamoxifen treatment (left) and expression of IRF9 mRNA before and after tamoxifen (right), were quantified by real-time RT-PCR and normalized to GAPDH mRNA expression. Weak expression of Sin3B protein in Sin3A F/– Sin3B F/– fibroblasts before 4OH-T treatment is likely due to some leakiness of Cre recombinase expression. Quantitative data are representative examples of three (A and F) or two (B, C, E, and G) independent experiments, each performed in duplicate, and error bars represent +SD. *, P < 0.05; **, P < 0.005; ***, P < 0.001.
Article Snippet: Antibodies used were anti-IRF9 , anti-STAT1, anti-STAT2, anti-phospho-STAT1 and anti-phospho-STAT2 (Invitrogen), anti–α-tubulin (T9026; Sigma), anti-HDAC1 (clone 2E10, 05-614; Millipore Sigma),
Techniques: Expressing, Quantitative RT-PCR, Transfection, Western Blot, Molecular Weight, Construct